Gene: Solyc01g104700.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g104700.4
  • Transcript Identifier Solyc01g104700.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 85418648-85421674 : negative

Gene Family Information

  • ID HOM05D001746
  • #Genes/#Species 371/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g104700.4.1
  • uniprot A0A3Q7ES45
  • gene_id Solyc01g104700

Descriptions

  • Description Ran protein/TC4 protein ran2b
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G20020
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G20010
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G20010
GO:0000054
IBA
GOA Databaseribosomal subunit export from nucleus
GO:0006606
IBA
GOA Databaseprotein import into nucleus
GO:0006913
IEA
GOA Databasenucleocytoplasmic transport
GO:0006913
IEA
InterPronucleocytoplasmic transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G20020
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G20020
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IBA
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G20010
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G20010
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G20010
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G55190
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G20010
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT5G20020
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G20020
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G20020
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005225 Small GTP-binding protein domain
IPR002041 Ran GTPase
IPR001806 Small GTPase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
23.5.1.3 Protein translocation.nucleus.nucleocytoplasmic transport.GTPase (Ran)