Gene: Solyc01g088560.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g088560.3
  • Transcript Identifier Solyc01g088560.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 75581403-75586392 : negative

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g088560.3.1
  • uniprot A0A3Q7EJA4
  • gene_id Solyc01g088560

Descriptions

  • Description Rab family GTPase (AHRD V3.3 *** A0A1Y1IFP9_KLENI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0052324
ISO
PLAZA Integrative Orthologyplant-type cell wall cellulose biosynthetic process AT2G44610
GO:0032940
ISO
PLAZA Integrative Orthologysecretion by cell AT2G44610
GO:0001558
ISO
PLAZA Integrative Orthologyregulation of cell growth AT2G44610
GO:0006887
ISO
PLAZA Integrative Orthologyexocytosis AT2G44610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G44610
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G44610
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT2G44610
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT2G44610
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G44610
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT2G44610
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G44610
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G44610
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT2G44610
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT2G44610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.8 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.H-class RAB GTPase