Gene: Solyc01g068290.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g068290.4
  • Transcript Identifier Solyc01g068290.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 70224433-70232056 : negative

Gene Family Information

  • ID HOM05D005018
  • #Genes/#Species 148/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g068290.4.1
  • uniprot A0A3Q7EH20
  • gene_id Solyc01g068290

Descriptions

  • Description tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (AHRD V3.3 *** A0A2G3AKP6_CAPAN),Pfam:PF01134
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002098
IBA
IEA
GOA DatabasetRNA wobble uridine modification
GO:0002098
IEA
InterProtRNA wobble uridine modification
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0008033
IEA
InterProtRNA processing
GO:0070899
IBA
GOA Databasemitochondrial tRNA wobble uridine modification
GO:0030488
IBA
GOA DatabasetRNA methylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050660
IBA
IEA
GOA Databaseflavin adenine dinucleotide binding
GO:0050660
IEA
InterProflavin adenine dinucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IBA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044920 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain
IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR040131 MnmG, N-terminal domain
IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related
IPR026904 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal
Mapman id Description
35.1 not assigned.annotated