Gene: Solyc01g008310.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g008310.4
  • Transcript Identifier Solyc01g008310.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 2357085-2370102 : negative

Gene Family Information

  • ID HOM05D003829
  • #Genes/#Species 181/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g008310.4.1
  • uniprot A0A3Q7E8X9
  • gene_id Solyc01g008310

Descriptions

  • Description Phenylalanine--tRNA ligase beta subunit (AHRD V3.3 *** A0A0G2HIH6_9PEZI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006432
IBA
IEA
GOA Databasephenylalanyl-tRNA aminoacylation
GO:0006432
IEA
InterProphenylalanyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0000287
IEA
GOA Databasemagnesium ion binding
GO:0000287
IEA
InterPromagnesium ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0016874
IEA
GOA Databaseligase activity
GO:0004826
IEA
GOA Databasephenylalanine-tRNA ligase activity
GO:0004826
IEA
InterProphenylalanine-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G72550
GO:0009328
IBA
GOA Databasephenylalanine-tRNA ligase complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005146 B3/B4 tRNA-binding domain
IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain
IPR005147 tRNA synthetase, B5-domain
IPR009061 Putative DNA-binding domain superfamily
IPR020825 Phenylalanyl-tRNA synthetase-like, B3/B4
IPR040659 Phenylalanine--tRNA ligase beta subunit, B1 domain
IPR045060 Phenylalanine-tRNA ligase, class IIc, beta subunit
IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archael/eukaryotic type
Mapman id Description
17.2.16.2 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase heterodimer.subunit beta