Gene: Solyc01g007120.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g007120.3
  • Transcript Identifier Solyc01g007120.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 1670884-1675106 : negative

Gene Family Information

  • ID HOM05D004480
  • #Genes/#Species 160/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g007120.3.1
  • uniprot A0A3Q7E9A2
  • gene_id Solyc01g007120

Descriptions

  • Description Protein serine/threonine kinase (AHRD V3.3 *** F4J3A9_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016310
IEA
GOA Databasephosphorylation
GO:0030490
IBA
GOA Databasematuration of SSU-rRNA
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0006468
IEA
InterProprotein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004672
IBA
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0004674
IEA
InterProprotein serine/threonine kinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0106310
IEA
GOA Databaseprotein serine kinase activity
GO:0106311
IEA
GOA Databaseprotein threonine kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
IBA
GOA Databasecytosol
GO:0030688
IBA
GOA Databasepreribosome, small subunit precursor

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015285 RIO2 kinase winged helix domain, N-terminal
IPR030484 Serine/threonine-protein kinase Rio2
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR011009 Protein kinase-like domain superfamily
IPR000687 RIO kinase
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
17.1.3.2.2.3 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear export.protein kinase (RIO2)
18.4.21 Protein modification.phosphorylation.atypical protein kinase (RIO)