Gene: Solyc01g006960.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g006960.3
  • Transcript Identifier Solyc01g006960.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 1527656-1546584 : negative

Gene Family Information

  • ID HOM05D004363
  • #Genes/#Species 164/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g006960.3.1
  • uniprot A0A3Q7E881
  • gene_id Solyc01g006960

Descriptions

  • Description Trafficking protein particle complex subunit 8 (AHRD V3.3 *** A0A1J3IJK6_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006888
IBA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0034497
IBA
GOA Databaseprotein localization to phagophore assembly site
GO:0030242
IBA
GOA Databaseautophagy of peroxisome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031410
IBA
GOA Databasecytoplasmic vesicle
GO:0000407
IBA
GOA Databasephagophore assembly site
GO:1990072
IBA
GOA DatabaseTRAPPIII protein complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024420 TRAPP III complex, Trs85
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
22.3.4.7.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.TRAPP-III-complex-specific components.component TRAPPC8/TRS85