Gene: Solyc00g500020.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc00g500020.1
  • Transcript Identifier Solyc00g500020.1.1
  • Gene Type Coding gene
  • Location SL4.0ch00 : 1366069-1367940 : positive

Gene Family Information

  • ID HOM05D000806
  • #Genes/#Species 732/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc00g500020.1.1
  • gene_id Solyc00g500020

Descriptions

  • Description Cytochrome f (AHRD V3.3 *** A0A2G3ALJ3_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
InterProphotosynthesis
GO:0009767
ISO
PLAZA Integrative Orthologyphotosynthetic electron transport chain ATCG00540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005506
IEA
InterProiron ion binding
GO:0009055
IEA
InterProelectron transfer activity
GO:0020037
IEA
InterProheme binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00540
GO:0045158
ISO
PLAZA Integrative Orthologyelectron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity ATCG00540

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0031361
IEA
InterProintegral component of thylakoid membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00540
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00540
GO:0009512
ISO
PLAZA Integrative Orthologycytochrome b6f complex ATCG00540
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00540
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid ATCG00540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004282 Chloroplast envelope membrane protein, CemA
IPR002325 Cytochrome f
IPR011054 Rudiment single hybrid motif
IPR036826 Cytochrome f large domain superfamily
IPR024058 Cytochrome f transmembrane anchor
IPR024094 Cytochrome f large domain
Mapman id Description
1.1.1.5.3.1.6 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qE/qZ-type quenching.regulatory protein (YCF10)
1.1.2.1 Photosynthesis.photophosphorylation.cytochrome b6/f complex.apocytochrome f component PetA