Gene: Sed0016798

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0016798
  • Transcript Identifier Sed0016798.1
  • Gene Type Coding gene
  • Location LG08 : 6118102-6123314 : negative

Gene Family Information

  • ID HOM05D006226
  • #Genes/#Species 128/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0016798.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008033
IEA
InterProtRNA processing
GO:0010098
ISO
PLAZA Integrative Orthologysuspensor development AT3G24560
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G24560
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT3G24560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0005524
IEA
InterProATP binding
GO:0016879
IEA
InterProligase activity, forming carbon-nitrogen bonds

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012795 tRNA(Ile)-lysidine synthase, N-terminal
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
IPR012094 tRNA(Ile)-lysidine synthase
Mapman id Description
35.1 not assigned.annotated