Gene: Sed0003146

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0003146
  • Transcript Identifier Sed0003146.1
  • Gene Type Coding gene
  • Location LG01 : 5882941-5884755 : negative

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0003146.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT5G41700
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G41700
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination Os02g0261100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G41700
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G41700

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G41700
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G41700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR000608 Ubiquitin-conjugating enzyme E2
Mapman id Description
19.2.2.5.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.MUB conjugation.conjugation E2 protein