Gene: Sc24g0003930
General Information
Structural Information
- Species Simmondsia chinensis
- Gene Identifier Sc24g0003930
- Transcript Identifier Sc24g0003930.01
- Gene Type Coding gene
- Location GWHAASQ00000024 : 18857335-18867082 : positive
Gene Family Information
- ID HOM05D000548
- #Genes/#Species 997/100
- Phylogenetic origin
- ID ORTHO05D000987
- #Genes/#Species 528/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sc24g0003930.01
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016567 | IEA | InterPro | protein ubiquitination | |
GO:1901485 | ISO | PLAZA Integrative Orthology | positive regulation of transcription factor catabolic process | AT5G18650 |
GO:1900425 | ISO | PLAZA Integrative Orthology | negative regulation of defense response to bacterium | AT5G18650 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT5G18650 |
GO:0008134 | ISO | PLAZA Integrative Orthology | transcription factor binding | AT5G18650 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G18650 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G18650 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR039512 | RCHY1, zinc-ribbon |
IPR027370 | RING-type zinc-finger, LisH dimerisation motif |
IPR013083 | Zinc finger, RING/FYVE/PHD-type |
IPR031109 | Ring finger and CHY zinc finger domain-containing protein, plant |
IPR037274 | Zinc finger, CHY-type superfamily |
IPR001841 | Zinc finger, RING-type |
IPR008913 | Zinc finger, CHY-type |
IPR037275 | Zinc finger, CTCHY-type superfamily |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |