Gene: Sc17g0005420
General Information
Structural Information
- Species Simmondsia chinensis
- Gene Identifier Sc17g0005420
- Transcript Identifier Sc17g0005420.01
- Gene Type Coding gene
- Location GWHAASQ00000017 : 28005226-28010007 : positive
Gene Family Information
- ID HOM05D001274
- #Genes/#Species 492/99
- Phylogenetic origin
- ID ORTHO05D001898
- #Genes/#Species 340/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sc17g0005420.01
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009615 | ISO | PLAZA Integrative Orthology | response to virus | AT4G18040 |
| GO:0050687 | ISO | PLAZA Integrative Orthology | negative regulation of defense response to virus | AT5G35620 |
| GO:0034059 | ISO | PLAZA Integrative Orthology | response to anoxia | Zm00001eb137550 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | Solyc02g021550.3 |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | Zm00001eb137550 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | Zm00001eb137550 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | Zm00001eb137550 |
| GO:0006413 | IEA | InterPro | translational initiation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Solyc03g005870.4 |
| GO:0000340 | ISO | PLAZA Integrative Orthology | RNA 7-methylguanosine cap binding | AT5G35620 |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0000339 | ISO | PLAZA Integrative Orthology | RNA cap binding | AT4G18040 |
| GO:0003743 | IEA | InterPro | translation initiation factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G35620 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G18040 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G18040 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT4G18040 |
| GO:0000932 | ISO | PLAZA Integrative Orthology | P-body | AT4G18040 |
| GO:0010494 | ISO | PLAZA Integrative Orthology | cytoplasmic stress granule | AT4G18040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.4.2.3.1 | Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.component eIF4E |