Gene: Sc11g0006900

General Information

Structural Information

Species Simmondsia chinensis
Gene Identifier Sc11g0006900
Transcript Identifier Sc11g0006900.01
Gene Type Coding gene
Location GWHAASQ00000011 : 35318513-35323183 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000373
#Genes/#Species 1301/100
Phylogenetic origin

ID ORTHO05D001146
#Genes/#Species 475/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Sc11g0006900.01

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080147	ISO	PLAZA Integrative Orthology	root hair cell development	AT3G06300
GO:0018401	ISO	PLAZA Integrative Orthology	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	AT3G06300

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005506	IEA	InterPro	iron ion binding
GO:0016705	IEA	InterPro	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031418	IEA	InterPro	L-ascorbic acid binding
GO:0004656	ISO	PLAZA Integrative Orthology	procollagen-proline 4-dioxygenase activity	AT3G06300

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G18900
GO:0005802	ISO	PLAZA Integrative Orthology	trans-Golgi network	AT3G06300
GO:0005768	ISO	PLAZA Integrative Orthology	endosome	AT3G06300
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT5G18900
GO:0005794	ISO	PLAZA Integrative Orthology	Golgi apparatus	AT5G18900
GO:0005783	ISO	PLAZA Integrative Orthology	endoplasmic reticulum	AT5G18900

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003582	ShKT domain
IPR006620	Prolyl 4-hydroxylase, alpha subunit
IPR045054	Prolyl 4-hydroxylase
IPR044862	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain

Mapman id	Description
18.9.1	Protein modification.hydroxylation.prolyl hydroxylase