Gene: SalBow3G3405
General Information
Structural Information
- Species Salvia bowleyana
- Gene Identifier SalBow3G3405
- Transcript Identifier SalBow3G3405.1
- Gene Type Coding gene
- Location GWHASIU00000006 : 34068068-34078041 : negative
Gene Family Information
- ID HOM05D002182
- #Genes/#Species 307/100
- Phylogenetic origin
- ID ORTHO05D008382
- #Genes/#Species 120/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name NDS_059953
- Accession GWHGASIU035460
- Accession GWHTASIU035541
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | InterPro | DNA topological change | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT5G63920 |
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT5G63920 |
| GO:0000712 | ISO | PLAZA Integrative Orthology | resolution of meiotic recombination intermediates | AT5G63920 |
| GO:0007059 | ISO | PLAZA Integrative Orthology | chromosome segregation | AT5G63920 |
| GO:0000278 | ISO | PLAZA Integrative Orthology | mitotic cell cycle | AT5G63920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003916 | IEA | InterPro | DNA topoisomerase activity | |
| GO:0003917 | IEA | InterPro | DNA topoisomerase type I (single strand cut, ATP-independent) activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G32000 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006171 | TOPRIM domain |
| IPR013497 | DNA topoisomerase, type IA, central |
| IPR000380 | DNA topoisomerase, type IA |
| IPR023405 | DNA topoisomerase, type IA, core domain |
| IPR003601 | DNA topoisomerase, type IA, domain 2 |
| IPR003602 | DNA topoisomerase, type IA, DNA-binding domain |
| IPR013826 | DNA topoisomerase, type IA, central region, subdomain 3 |
| IPR013824 | DNA topoisomerase, type IA, central region, subdomain 1 |
| Mapman id | Description |
|---|---|
| 12.3.4.3.2 | Chromatin organisation.post-translational histone modification.histone arginine methylation.TDRD3-TOP3B methyl-arginine reader complex.topoisomerase component TOP3b |
| 15.3.6.2.3 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.type-1A topoisomerase (TOP3b) |