Gene: Sabra03G0004700
General Information
Structural Information
- Species Salix brachista
- Gene Identifier Sabra03G0004700
- Transcript Identifier Sabra03G0004700.1
- Gene Type Coding gene
- Location GWHAAZH00000003 : 456196-464286 : positive
Gene Family Information
- ID HOM05D004410
- #Genes/#Species 162/97
- Phylogenetic origin
- ID ORTHO05D006134
- #Genes/#Species 147/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sabra03G0004700.1
- Accession GWHGAAZH004034
- Accession GWHTAAZH004034
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070476 | IEA | InterPro | rRNA (guanine-N7)-methylation | |
| GO:0016226 | IEA | InterPro | iron-sulfur cluster assembly | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G57280 |
| GO:0006364 | ISO | PLAZA Integrative Orthology | rRNA processing | AT5G57280 |
| GO:0010078 | ISO | PLAZA Integrative Orthology | maintenance of root meristem identity | AT5G57280 |
| GO:0048527 | ISO | PLAZA Integrative Orthology | lateral root development | AT5G57280 |
| GO:1990110 | ISO | PLAZA Integrative Orthology | callus formation | AT5G57280 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016435 | IEA | InterPro | rRNA (guanine) methyltransferase activity | |
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G57280 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G57280 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034904 | Fe-S cluster assembly domain superfamily |
| IPR022238 | 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23, C-terminal |
| IPR013216 | Methyltransferase type 11 |
| IPR001075 | NIF system FeS cluster assembly, NifU, C-terminal |
| IPR039769 | 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-like |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| Mapman id | Description |
|---|---|
| 17.1.1.2.1.4 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22) |
| 7.11.1.2.2 | Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.transfer phase.scaffold protein (NFU1/2/3) |