Gene: SHI53210

General Information

Structural Information

  • Species Sapria himalayana
  • Gene Identifier SHI53210
  • Transcript Identifier SHI53210-RA
  • Gene Type Coding gene
  • Location scaffold4926_19668 : 1155-2823 : positive

Gene Family Information

  • ID HOM05D000727
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SHI53210-RA

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT5G23420
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated Zm00001eb271910
GO:0006333
ISO
PLAZA Integrative Orthologychromatin assembly or disassembly AT3G51880
GO:0000741
ISO
PLAZA Integrative Orthologykaryogamy AT5G23420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G51880
GO:0030527
ISO
PLAZA Integrative Orthologystructural constituent of chromatin AT3G51880
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding Zm00001eb271910
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT3G51880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Zm00001eb271910
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G17560
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G51880
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT3G51880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031061 High mobility group protein HMGB, plant
IPR009071 High mobility group box domain
IPR036910 High mobility group box domain superfamily
Mapman id Description
12.1.3.1 Chromatin organisation.chromatin structure.DNA bending.architectural protein (HMG-B)