Gene: SHI34428
General Information
Structural Information
- Species Sapria himalayana
- Gene Identifier SHI34428
- Transcript Identifier SHI34428-RA
- Gene Type Coding gene
- Location scaffold136_644153 : 151524-190629 : positive
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid SHI34428-RA
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration | |
| GO:0006435 | IEA | InterPro | threonyl-tRNA aminoacylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004829 | IEA | InterPro | threonine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001584 | Integrase, catalytic core |
| IPR018163 | Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily |
| IPR025724 | GAG-pre-integrase domain |
| IPR002320 | Threonine-tRNA ligase, class IIa |
| IPR012675 | Beta-grasp domain superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR004095 | TGS |
| IPR012676 | TGS-like |
| Mapman id | Description |
|---|---|
| 50.6.1 | Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond |