Gene: SHI09348
General Information
Structural Information
- Species Sapria himalayana
- Gene Identifier SHI09348
- Transcript Identifier SHI09348-RA
- Gene Type Coding gene
- Location scaffold9_16683904 : 9721226-9722173 : positive
Gene Family Information
- ID HOM05D000244
- #Genes/#Species 1727/95
- Phylogenetic origin
- ID ORTHO05D000179
- #Genes/#Species 1482/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid SHI09348-RA
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT2G45430 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT2G42940 |
| GO:0010529 | ISO | PLAZA Integrative Orthology | negative regulation of transposition | AT2G42940 |
| GO:0048653 | ISO | PLAZA Integrative Orthology | anther development | AT2G35270 |
| GO:0010208 | ISO | PLAZA Integrative Orthology | pollen wall assembly | AT2G42940 |
| GO:0009938 | ISO | PLAZA Integrative Orthology | negative regulation of gibberellic acid mediated signaling pathway | AT4G35390 |
| GO:0009647 | ISO | PLAZA Integrative Orthology | skotomorphogenesis | AT2G45430 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT1G20900 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT2G35270 |
| GO:0048440 | ISO | PLAZA Integrative Orthology | carpel development | AT2G35270 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT3G60870 |
| GO:0045824 | ISO | PLAZA Integrative Orthology | negative regulation of innate immune response | AT1G20900 |
| GO:0006325 | ISO | PLAZA Integrative Orthology | chromatin organization | AT1G20900 |
| GO:1900111 | ISO | PLAZA Integrative Orthology | positive regulation of histone H3-K9 dimethylation | AT2G42940 |
| GO:0035067 | ISO | PLAZA Integrative Orthology | negative regulation of histone acetylation | AT2G42940 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT1G20900 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G42940 |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT2G35270 |
| GO:0042826 | ISO | PLAZA Integrative Orthology | histone deacetylase binding | AT2G45430 |
| GO:0003680 | IEA | InterPro | minor groove of adenine-thymine-rich DNA binding | |
| GO:0031490 | ISO | PLAZA Integrative Orthology | chromatin DNA binding | AT2G42940 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT4G35390 |
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT4G35390 |
| GO:0003690 | ISO | PLAZA Integrative Orthology | double-stranded DNA binding | AT1G20900 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G42940 |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT2G35270 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.8.1 | RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL) |