Gene: SGA_v2.0_scaffold96G28928

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold96G28928
  • Transcript Identifier SGA_v2.0_scaffold96T28928
  • Gene Type Coding gene
  • Location scaffold96 : 124261-127210 : positive

Gene Family Information

  • ID HOM05D000537
  • #Genes/#Species 1018/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product XH/XS domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
IEA
InterProgene silencing by RNA
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT1G80790
GO:0010569
ISO
PLAZA Integrative Orthologyregulation of double-strand break repair via homologous recombination AT1G15910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT1G15910
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G15910
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G15910
GO:0003725
ISO
PLAZA Integrative Orthologydouble-stranded RNA binding AT1G15910
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT1G15910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G15910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038588 XS domain superfamily
IPR005379 Uncharacterised domain XH
IPR005380 XS domain
IPR005381 Zinc finger-XS domain
Mapman id Description
12.5.1.4 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.regulatory protein (IDN/IDP)