Gene: SGA_v2.0_scaffold7G04164
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold7G04164
- Transcript Identifier SGA_v2.0_scaffold7T04164
- Gene Type Coding gene
- Location scaffold7 : 4214674-4216107 : negative
Gene Family Information
- ID HOM05D000280
- #Genes/#Species 1564/100
- Phylogenetic origin
- ID ORTHO05D004510
- #Genes/#Species 178/92
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Elongation factor Tu
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT4G20360 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT4G20360 |
| GO:0006414 | IEA | InterPro | translational elongation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G20360 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G20360 |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003746 | IEA | InterPro | translation elongation factor activity | |
| GO:0003924 | IEA | InterPro | GTPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT4G20360 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT4G20360 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G20360 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G20360 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT4G20360 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT4G20360 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT4G20360 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT4G20360 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT4G20360 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G20360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR004161 | Translation elongation factor EFTu-like, domain 2 |
| IPR000795 | Translational (tr)-type GTP-binding domain |
| IPR005225 | Small GTP-binding protein domain |
| IPR004160 | Translation elongation factor EFTu/EF1A, C-terminal |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR009001 | Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal |
| IPR041709 | Elongation factor Tu (EF-Tu), GTP-binding domain |
| IPR004541 | Translation elongation factor EFTu/EF1A, bacterial/organelle |
| IPR033720 | Elongation factor Tu, domain 2 |
| Mapman id | Description |
|---|---|
| 17.7.4.1 | Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Tu) |