Gene: AT4G20360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G20360
  • Transcript Identifier AT4G20360.2
  • Gene Type Coding gene
  • Location Chr4 : 10990036-10991466 : positive

Gene Family Information

  • ID HOM05D000280
  • #Genes/#Species 1564/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G20360.2
  • symbol RABE1b
  • Alias ATRAB8D,ATRABE1B,RAB GTPase homolog E1B
  • uniprot P17745

Descriptions

  • Description RAB GTPase homolog E1B
  • Computational description RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0006414
IBA
Gene Ontologytranslational elongation1
GO:0006414
IEA
InterProtranslational elongation
GO:0009658
IGI
Gene Ontologychloroplast organization2
GO:0048366
IGI
Gene Ontologyleaf development2
GO:0070125
IBA
Gene Ontologymitochondrial translational elongation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003746
IEA
GOA Databasetranslation elongation factor activity
GO:0003746
IBA
Gene Ontologytranslation elongation factor activity1
GO:0003746
IEA
InterProtranslation elongation factor activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0003729
IDA
Gene OntologymRNA binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IDA
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid5
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast2 6
GO:0042644
IDA
GOA Databasechloroplast nucleoid
GO:0042644
HDA
Gene Ontologychloroplast nucleoid7
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma8
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus9
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope10
GO:0009535
IDA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane11
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast12
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid13
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus14
GO:0005829
RCA
Gene Ontologycytosol15
GO:0005739
IBA
Gene Ontologymitochondrion1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009000 Translation protein, beta-barrel domain superfamily
IPR000795 Translational (tr)-type GTP-binding domain
IPR033720 Elongation factor Tu, domain 2
IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain
IPR005225 Small GTP-binding protein domain
Mapman id Description
17.7.4.1 Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Tu)