Gene: SGA_v2.0_scaffold73G24449

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold73G24449
  • Transcript Identifier SGA_v2.0_scaffold73T24449
  • Gene Type Coding gene
  • Location scaffold73 : 1320074-1323663 : positive

Gene Family Information

  • ID HOM05D000627
  • #Genes/#Species 910/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Transcription factor PIF3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT3G59060
GO:0090229
ISO
PLAZA Integrative Orthologynegative regulation of red or far-red light signaling pathway Os03g0782500
GO:0010100
ISO
PLAZA Integrative Orthologynegative regulation of photomorphogenesis AT2G20180
GO:0010244
ISO
PLAZA Integrative Orthologyresponse to low fluence blue light stimulus by blue low-fluence system AT3G59060
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT2G20180
GO:0010600
ISO
PLAZA Integrative Orthologyregulation of auxin biosynthetic process AT3G59060
GO:0009638
ISO
PLAZA Integrative Orthologyphototropism AT2G43010
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT3G59060
GO:0009959
ISO
PLAZA Integrative Orthologynegative gravitropism AT2G20180
GO:0080006
ISO
PLAZA Integrative Orthologyinternode patterning Os03g0782500
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway AT2G20180
GO:0009686
ISO
PLAZA Integrative Orthologygibberellin biosynthetic process AT2G20180
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G20180
GO:0010099
ISO
PLAZA Integrative Orthologyregulation of photomorphogenesis AT2G20180
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT2G43010
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Os03g0782500
GO:0009704
ISO
PLAZA Integrative Orthologyde-etiolation AT2G43010
GO:0006783
ISO
PLAZA Integrative Orthologyheme biosynthetic process AT2G20180
GO:0009693
ISO
PLAZA Integrative Orthologyethylene biosynthetic process AT3G59060
GO:0010161
ISO
PLAZA Integrative Orthologyred light signaling pathway AT2G20180
GO:0010187
ISO
PLAZA Integrative Orthologynegative regulation of seed germination AT2G20180
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT2G20180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G20180
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G20180
GO:0047834
IEA
InterProD-threo-aldose 1-dehydrogenase activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT2G20180
GO:0010313
ISO
PLAZA Integrative Orthologyphytochrome binding AT2G20180
GO:1990841
ISO
PLAZA Integrative Orthologypromoter-specific chromatin binding AT3G59060
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT2G20180
GO:0046983
IEA
InterProprotein dimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G20180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023210 NADP-dependent oxidoreductase domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036812 NADP-dependent oxidoreductase domain superfamily
IPR031066 Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.1.1.7 External stimuli response.light.red/far red light.transcriptional regulator (PIF)