Gene: SGA_v2.0_scaffold54G19647

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold54G19647
  • Transcript Identifier SGA_v2.0_scaffold54T19647
  • Gene Type Coding gene
  • Location scaffold54 : 1514846-1521387 : positive

Gene Family Information

  • ID HOM05D001214
  • #Genes/#Species 516/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product High mobility group family
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated Zm00001eb271910
GO:0006333
ISO
PLAZA Integrative Orthologychromatin assembly or disassembly AT2G17560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
InterProhydrolase activity
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G17560
GO:0030527
ISO
PLAZA Integrative Orthologystructural constituent of chromatin AT2G17560
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding Zm00001eb271910
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT2G17560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Zm00001eb271910
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G17560
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G35570
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT2G17560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029058 Alpha/Beta hydrolase fold
IPR036910 High mobility group box domain superfamily
IPR031061 High mobility group protein HMGB, plant
IPR002925 Dienelactone hydrolase
IPR009071 High mobility group box domain
IPR011992 EF-hand domain pair
Mapman id Description
12.1.3.1 Chromatin organisation.chromatin structure.DNA bending.architectural protein (HMG-B)