Gene: SGA_v2.0_scaffold50G18469

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold50G18469
  • Transcript Identifier SGA_v2.0_scaffold50T18469
  • Gene Type Coding gene
  • Location scaffold50 : 480338-480987 : positive

Gene Family Information

  • ID HOM05D002447
  • #Genes/#Species 278/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product High mobility group protein I/Y
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development Zm00001eb041850
GO:0006355
ISO
PLAZA Homology (enrichment)regulation of transcription, DNA-templated HOM05D002447

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Zm00001eb041850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0005634
IEA
InterPronucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G14900
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus Zm00001eb041850
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT1G14900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005818 Linker histone H1/H5, domain H15
IPR017956 AT hook, DNA-binding motif
IPR031059 High mobility group protein HMGA, plant
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
35.2 not assigned.not annotate