Gene: SGA_v2.0_scaffold3G01472
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold3G01472
- Transcript Identifier SGA_v2.0_scaffold3T01472
- Gene Type Coding gene
- Location scaffold3 : 490208-507851 : positive
Gene Family Information
- ID HOM05D001447
- #Genes/#Species 436/100
- Phylogenetic origin
- ID ORTHO05D008204
- #Genes/#Species 122/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Magnesium-chelatase subunit ChlD, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015995 | ISO | PLAZA Integrative Orthology | chlorophyll biosynthetic process | AT1G08520 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003779 | IEA | InterPro | actin binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016851 | ISO | PLAZA Homology (enrichment) | magnesium chelatase activity | HOM05D001447 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G08520 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G08520 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT1G08520 |
| GO:0010007 | ISO | PLAZA Integrative Orthology | magnesium chelatase complex | AT1G08520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036638 | Helix-loop-helix DNA-binding domain superfamily |
| IPR002108 | Actin-depolymerising factor homology domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily |
| IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| IPR000523 | Magnesium chelatase ChlI-like, catalytic domain |
| Mapman id | Description |
|---|---|
| 15.5.30 | RNA biosynthesis.transcriptional regulation.transcription factor (bHLH) |
| 20.2.2.8 | Cytoskeleton organisation.microfilament network.actin polymerisation.actin-depolymerizing factor (ADF) |
| 26.1.2.1.2 | External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.transcriptional regulator (CIB) |
| 7.13.1.1.1 | Coenzyme metabolism.chlorophyll metabolism.chlorophyll biosynthesis.magnesium-chelatase complex.component CHLD |