Gene: SGA_v2.0_scaffold3G01470
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold3G01470
- Transcript Identifier SGA_v2.0_scaffold3T01470
- Gene Type Coding gene
- Location scaffold3 : 463206-480475 : negative
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D004881
- #Genes/#Species 169/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Chromodomain-helicase-DNA-binding protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G13370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G13370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR025260 | Domain of unknown function DUF4208 |
| IPR001650 | Helicase, C-terminal |
| IPR000330 | SNF2, N-terminal |
| IPR023780 | Chromo domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR016197 | Chromo-like domain superfamily |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000953 | Chromo/chromo shadow domain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Mapman id | Description |
|---|---|
| 12.4.7.1 | Chromatin organisation.nucleosome remodeling.CHD chromatin remodeling activities.CHD1-type chromatin remodeling factor (CHR5) |
| 15.3.4.3.4 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.component CHR5 |