Gene: SGA_v2.0_scaffold2G01163

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold2G01163
  • Transcript Identifier SGA_v2.0_scaffold2T01163
  • Gene Type Coding gene
  • Location scaffold2 : 3357319-3363853 : positive

Gene Family Information

  • ID HOM05D000922
  • #Genes/#Species 652/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product 40S ribosomal protein S13
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G62820
GO:0000911
ISO
PLAZA Integrative Orthologycytokinesis by cell plate formation AT4G00100
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT4G00100
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT4G00100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
InterProcalcium ion binding
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G00100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G12310
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G12310
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT4G00100
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G12310
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G00100
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G00100
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G12310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002048 EF-hand domain
IPR000589 Ribosomal protein S15
IPR012606 Ribosomal protein S13/S15, N-terminal
IPR023029 Ribosomal protein S15P
IPR009068 S15/NS1, RNA-binding
IPR011992 EF-hand domain pair
Mapman id Description
17.1.3.1.14 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS13
27.7.2 Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)