Gene: AT1G12310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G12310
  • Transcript Identifier AT1G12310.1
  • Gene Type Coding gene
  • Location Chr1 : 4187500-4187946 : negative

Gene Family Information

  • ID HOM05D000227
  • #Genes/#Species 1818/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G12310.1
  • uniprot Q94AZ4

Descriptions

  • Description Calcium-binding EF-hand family protein
  • Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G62820.1); Has 15156 Blast hits to 13043 proteins in 1439 species: Archae - 0; Bacteria - 35; Metazoa - 6065; Fungi - 3861; Plants - 3197; Viruses - 0; Other Eukaryotes - 1998 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
GOA Databasecalcium ion binding
GO:0005509
IBA
Gene Ontologycalcium ion binding1
GO:0005509
IEA
InterProcalcium ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
ISM
Gene Ontologynucleus2
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane3
GO:0005737
IDA
Gene Ontologycytoplasm4
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol5
GO:0005576
HDA
Gene Ontologyextracellular region6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002048 EF-hand domain
IPR011992 EF-hand domain pair
Mapman id Description
27.7.2 Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)