Gene: SGA_v2.0_scaffold2G01085

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold2G01085
  • Transcript Identifier SGA_v2.0_scaffold2T01085
  • Gene Type Coding gene
  • Location scaffold2 : 2741726-2742391 : positive

Gene Family Information

  • ID HOM05D000078
  • #Genes/#Species 3763/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Dehydration-responsive element-binding protein 1B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G25470
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT4G25490
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT5G51990
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT4G25480
GO:0009631
ISO
PLAZA Integrative Orthologycold acclimation AT4G25470
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT4G25480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G25470
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G51990
GO:0000987
ISO
PLAZA Integrative Orthologycis-regulatory region sequence-specific DNA binding AT4G25480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.2 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB)
26.4.3.4.2 External stimuli response.temperature.cold response.ICE-CBF cold acclimation transcriptional cascade.transcription factor (CBF/DREB1)