Gene: SGA_v2.0_scaffold265G46057

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold265G46057
  • Transcript Identifier SGA_v2.0_scaffold265T46057
  • Gene Type Coding gene
  • Location scaffold265 : 29313-35004 : positive

Gene Family Information

  • ID HOM05D007352
  • #Genes/#Species 105/85
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006383
IEA
InterProtranscription by RNA polymerase III
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT1G51965
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G51965

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G51965

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024661 DNA-directed RNA polymerase III, subunit Rpc31
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR033443 Pentacotripeptide-repeat region of PRORP
Mapman id Description
15.4.5.3 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIe transcription factor complex.component RPC31
16.11.4.2.3 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.splicing factor (ABO5)