Gene: SGA_v2.0_scaffold19G08778
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold19G08778
- Transcript Identifier SGA_v2.0_scaffold19T08778
- Gene Type Coding gene
- Location scaffold19 : 1805896-1832374 : negative
Gene Family Information
- ID HOM05D005307
- #Genes/#Species 143/91
- Phylogenetic origin
- ID ORTHO05D006695
- #Genes/#Species 139/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product RNA recognition motif (RRM)-containing protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
| GO:1901652 | ISO | PLAZA Integrative Orthology | response to peptide | AT3G23900 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008408 | IEA | InterPro | 3'-5' exonuclease activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G23900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035979 | RNA-binding domain superfamily |
| IPR017868 | Filamin/ABP280 repeat-like |
| IPR013783 | Immunoglobulin-like fold |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR002562 | 3'-5' exonuclease domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR014756 | Immunoglobulin E-set |
| IPR001298 | Filamin/ABP280 repeat |
| Mapman id | Description |
|---|---|
| 14.4.2 | DNA damage response.nonhomologous end-joining (NHEJ) repair.KU-helicase-associated DNA exonuclease (WEX) |