Gene: SGA_v2.0_scaffold146G36265
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold146G36265
- Transcript Identifier SGA_v2.0_scaffold146T36265
- Gene Type Coding gene
- Location scaffold146 : 974793-977610 : positive
Gene Family Information
- ID HOM05D001458
- #Genes/#Species 433/99
- Phylogenetic origin
- ID ORTHO05D008462
- #Genes/#Species 119/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Type 2 DNA topoisomerase 6 subunit A
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042138 | IEA | InterPro | meiotic DNA double-strand break formation | |
| GO:0006259 | IEA | InterPro | DNA metabolic process | |
| GO:0051026 | ISO | PLAZA Integrative Orthology | chiasma assembly | AT1G63990 |
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT1G63990 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT1G63990 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT1G63990 |
| GO:0048437 | ISO | PLAZA Integrative Orthology | floral organ development | AT1G63990 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT1G63990 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G63990 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013048 | Meiotic recombination, Spo11 |
| IPR036078 | Spo11/DNA topoisomerase VI subunit A superfamily |
| IPR034136 | Topoisomerase 6 subunit A/Spo11, TOPRIM domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR013049 | Spo11/DNA topoisomerase VI, subunit A, N-terminal |
| IPR002815 | Spo11/DNA topoisomerase VI subunit A |
| Mapman id | Description |
|---|---|
| 13.3.5.2.1.1 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.component a/SPO11 |