Gene: SEGI_40144
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_40144
- Transcript Identifier SEGI_40144.1
- Gene Type Coding gene
- Location chr3 : 550843473-550858172 : negative
Gene Family Information
- ID HOM05D006589
- #Genes/#Species 122/94
- Phylogenetic origin
- ID ORTHO05D008350
- #Genes/#Species 120/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_40144.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G48500 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000427 | IEA | InterPro | plastid-encoded plastid RNA polymerase complex | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G48500 |
| GO:0009508 | ISO | PLAZA Integrative Orthology | plastid chromosome | AT3G48500 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G48500 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G48500 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT3G48500 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044967 | Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 |
| Mapman id | Description |
|---|---|
| 15.6.1.2.2.3 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP3/TAC10 |