Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 2.9e-193 678.3 323 100.0
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 8.1e-63 245.0 252 49.6
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 5.2e-62 242.3 252 49.6
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 5.2e-62 242.3 252 49.6
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.0e-61 240.4 254 49.2
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 2.6e-61 240.0 254 49.2
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 2.6e-61 240.0 252 48.8
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 3.4e-61 239.6 252 48.4
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 7.5e-61 238.4 252 49.2
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 9.9e-61 238.0 251 48.6
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 1.3e-60 237.7 255 47.5
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 1.7e-60 237.3 301 43.5
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.7e-60 237.3 254 51.2
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 2.9e-60 236.5 251 47.8
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 4.9e-60 235.7 252 47.2
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 4.9e-60 235.7 252 48.0
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 6.4e-60 235.3 273 45.4
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 3.2e-59 233.0 252 47.2
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 3.2e-59 233.0 252 47.2
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 5.4e-59 232.3 252 46.4
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 5.4e-59 232.3 252 48.4
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 5.4e-59 232.3 252 47.2
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 7.1e-59 231.9 292 42.1
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.2e-58 231.1 252 46.0
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 1.2e-58 231.1 271 45.4
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 2.1e-58 230.3 278 46.0
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 2.1e-58 230.3 252 47.6
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 7.8e-58 228.4 252 46.8
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.7e-57 227.3 251 45.8
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 2.3e-57 226.9 252 46.0
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 2.3e-57 226.9 252 46.0
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 3.0e-57 226.5 252 47.2
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 3.0e-57 226.5 284 43.7
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 3.9e-57 226.1 252 47.2
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 8.6e-57 224.9 252 45.6
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 1.1e-56 224.6 270 45.6
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.1e-56 224.6 255 45.9
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.5e-56 224.2 255 45.9
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 1.9e-56 223.8 251 47.4
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 1.9e-56 223.8 256 46.1
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 1.9e-56 223.8 252 46.0
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 3.3e-56 223.0 256 46.1
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 4.3e-56 222.6 256 45.7
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 4.3e-56 222.6 267 44.6
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 5.6e-56 222.2 252 47.2
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 7.3e-56 221.9 250 47.2
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 9.5e-56 221.5 270 44.8
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.6e-55 220.7 240 45.4
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 1.6e-55 220.7 270 45.9
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 2.1e-55 220.3 270 45.2
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 2.1e-55 220.3 270 45.6
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 2.8e-55 219.9 252 46.0
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 3.6e-55 219.5 256 44.5
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 3.6e-55 219.5 256 44.5
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 6.2e-55 218.8 256 46.1
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 6.2e-55 218.8 256 46.1
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 6.2e-55 218.8 256 45.7
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 8.1e-55 218.4 256 46.1
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 8.1e-55 218.4 252 45.2
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 1.4e-54 217.6 254 45.3
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.4e-54 217.6 271 44.6
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.8e-54 217.2 251 45.8
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 2.4e-54 216.9 271 44.6
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 2.4e-54 216.9 268 44.8
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 3.1e-54 216.5 256 44.5
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 4.0e-54 216.1 256 45.7
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 4.0e-54 216.1 256 45.7
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 4.0e-54 216.1 256 44.5
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 5.2e-54 215.7 256 45.3
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 6.8e-54 215.3 271 44.3
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 6.8e-54 215.3 271 44.3
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 8.9e-54 214.9 270 44.1
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 8.9e-54 214.9 271 43.9
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 1.2e-53 214.5 250 45.6
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 1.2e-53 214.5 271 43.9
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 2.6e-53 213.4 250 46.0
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 4.4e-53 212.6 251 45.0
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 7.6e-53 211.8 250 46.0
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 1.3e-52 211.1 254 46.1
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 3.8e-52 209.5 229 47.2
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 6.4e-52 208.8 255 45.5
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 1.1e-51 208.0 257 42.4
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 1.4e-51 207.6 227 46.7
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 1.9e-51 207.2 252 44.0
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 2.4e-51 206.8 248 44.0
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 2.4e-51 206.8 251 43.0
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 1.6e-50 204.1 267 45.3
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.7e-49 200.7 249 44.2
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 2.3e-49 200.3 246 43.1
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 1.1e-48 198.0 252 41.7
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 1.6e-47 194.1 147 60.5
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 2.8e-47 193.4 253 42.7
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 3.1e-46 189.9 144 60.4
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 1.2e-45 188.0 256 40.6
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.5e-45 187.6 225 44.0
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 2.6e-45 186.8 251 39.8
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 3.8e-44 183.0 229 44.5
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 6.4e-44 182.2 149 59.7
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.2e-42 177.9 146 57.5
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 7.8e-42 175.3 244 41.8
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 3.9e-41 172.9 254 39.8
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 7.6e-37 158.7 255 37.3
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 7.1e-35 152.1 326 33.4
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 2.1e-34 150.6 249 35.7
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 7.9e-34 148.7 279 33.0
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.5e-29 132.9 244 35.2
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.5e-29 132.9 244 35.2
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 5.1e-25 119.4 81 66.7
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.8e-22 110.9 147 43.5
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 1.4e-11 74.7 122 33.6
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 4.2e-11 73.2 154 31.2


User provided reference genes

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