Gene: SEGI_30459
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_30459
- Transcript Identifier SEGI_30459.1
- Gene Type Coding gene
- Location chr11 : 101579920-101581633 : negative
Gene Family Information
- ID HOM05D000008
- #Genes/#Species 9932/97
- Phylogenetic origin
- ID ORTHO05D000005
- #Genes/#Species 8869/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_30459.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071365 | ISO | PLAZA Integrative Orthology | cellular response to auxin stimulus | AT1G34670 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G56160 |
| GO:0006876 | ISO | PLAZA Integrative Orthology | cellular cadmium ion homeostasis | AT5G54230 |
| GO:0009866 | ISO | PLAZA Integrative Orthology | induced systemic resistance, ethylene mediated signaling pathway | AT1G56160 |
| GO:0006723 | ISO | PLAZA Integrative Orthology | cuticle hydrocarbon biosynthetic process | AT4G28110 |
| GO:1990532 | ISO | PLAZA Integrative Orthology | stress response to nickel ion | AT1G56160 |
| GO:0009759 | ISO | PLAZA Integrative Orthology | indole glucosinolate biosynthetic process | AT5G60890 |
| GO:1990359 | ISO | PLAZA Integrative Orthology | stress response to zinc ion | AT1G56160 |
| GO:0010628 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression | AT5G54230 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT1G56160 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT4G28110 |
| GO:0080090 | ISO | PLAZA Integrative Orthology | regulation of primary metabolic process | AT4G28110 |
| GO:0080091 | ISO | PLAZA Integrative Orthology | regulation of raffinose metabolic process | AT4G28110 |
| GO:0010345 | ISO | PLAZA Integrative Orthology | suberin biosynthetic process | AT5G10280 |
| GO:2000762 | ISO | PLAZA Integrative Orthology | regulation of phenylpropanoid metabolic process | AT4G17785 |
| GO:0009825 | ISO | PLAZA Integrative Orthology | multidimensional cell growth | AT4G28110 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT4G21440 |
| GO:0045723 | ISO | PLAZA Integrative Orthology | positive regulation of fatty acid biosynthetic process | AT5G10280 |
| GO:0002213 | ISO | PLAZA Integrative Orthology | defense response to insect | AT5G60890 |
| GO:0051365 | ISO | PLAZA Integrative Orthology | cellular response to potassium ion starvation | AT1G56160 |
| GO:1990641 | ISO | PLAZA Integrative Orthology | response to iron ion starvation | AT1G56160 |
| GO:0002237 | ISO | PLAZA Integrative Orthology | response to molecule of bacterial origin | AT1G56160 |
| GO:0010043 | ISO | PLAZA Integrative Orthology | response to zinc ion | AT1G56160 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT4G28110 |
| GO:0000162 | ISO | PLAZA Integrative Orthology | tryptophan biosynthetic process | AT5G60890 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT4G17785 |
| GO:0010438 | ISO | PLAZA Integrative Orthology | cellular response to sulfur starvation | AT5G60890 |
| GO:0019748 | ISO | PLAZA Integrative Orthology | secondary metabolic process | AT1G56160 |
| GO:0055065 | ISO | PLAZA Integrative Orthology | metal ion homeostasis | AT1G56160 |
| GO:1901332 | ISO | PLAZA Integrative Orthology | negative regulation of lateral root development | AT1G34670 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT4G21440 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT4G21440 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G34670 |
| GO:0000987 | ISO | PLAZA Integrative Orthology | cis-regulatory region sequence-specific DNA binding | AT5G10280 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G02940 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT5G54230 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G02940 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048226 | ISO | PLAZA Integrative Orthology | Casparian strip | AT4G17785 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G34670 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G34670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.1 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB) |