Gene: AT4G17785

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17785
  • Transcript Identifier AT4G17785.1
  • Gene Type Coding gene
  • Location Chr4 : 9881867-9883368 : negative

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17785.1
  • symbol MYB39
  • uniprot Q8GWP0

Descriptions

  • Description myb domain protein 39
  • Computational description myb domain protein 39 (MYB39); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 9 (TAIR:AT5G16770.2); Has 8868 Blast hits to 8222 proteins in 473 species: Archae - 0; Bacteria - 0; Metazoa - 774; Fungi - 431; Plants - 5960; Viruses - 6; Other Eukaryotes - 1697 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0010345
IMP
Gene Ontologysuberin biosynthetic process2
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated2
GO:2000762
IDA, IMP
Gene Ontologyregulation of phenylpropanoid metabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity1 3
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0048226
IDA
Gene OntologyCasparian strip2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)