Gene: SEGI_28858

General Information

Structural Information

  • Species Sequoiadendron giganteum
  • Gene Identifier SEGI_28858
  • Transcript Identifier SEGI_28858.1
  • Gene Type Coding gene
  • Location chr7 : 411454175-411473725 : positive

Gene Family Information

  • ID HOM05D000346
  • #Genes/#Species 1367/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SEGI_28858.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080092
ISO
PLAZA Integrative Orthologyregulation of pollen tube growth AT4G38430
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT2G45890
GO:2000012
ISO
PLAZA Integrative Orthologyregulation of auxin polar transport AT4G38430
GO:2001108
ISO
PLAZA Integrative Orthologypositive regulation of Rho guanyl-nucleotide exchange factor activity AT4G38430
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G52240
GO:0080147
ISO
PLAZA Integrative Orthologyroot hair cell development AT1G52240
GO:0009664
ISO
PLAZA Integrative Orthologyplant-type cell wall organization AT5G02010
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT2G45890
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G79860
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT4G38430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G38430
GO:0005085
IEA
InterProguanyl-nucleotide exchange factor activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G24620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G52240
GO:0090406
ISO
PLAZA Integrative Orthologypollen tube AT1G79860
GO:0016324
ISO
PLAZA Integrative Orthologyapical plasma membrane AT4G38430
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G02010
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G52240
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G38430
GO:0009531
ISO
PLAZA Integrative Orthologysecondary cell wall AT2G45890

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038937 Rop guanine nucleotide exchange factor
IPR005512 PRONE domain
Mapman id Description
27.4.3.1 Multi-process regulation.Rop-GTPase regulatory system.RopGEF guanine nucleotide exchange factor activities.exchange factor (PRONE)