Gene: AT2G45890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G45890
  • Transcript Identifier AT2G45890.1
  • Gene Type Coding gene
  • Location Chr2 : 18883540-18885440 : positive

Gene Family Information

  • ID HOM05D000346
  • #Genes/#Species 1367/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G45890.1
  • symbol ROPGEF4
  • Alias ATROPGEF4,RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 4,GEF4,guanine exchange factor 4,RHS11,ROOT HAIR SPECIFIC 11
  • full_name ROP (rho of plants) guanine nucleotide exchange factor 4
  • uniprot Q0WNP7

Descriptions

  • Description RHO guanyl-nucleotide exchange factor 4
  • Computational description RHO guanyl-nucleotide exchange factor 4 (ROPGEF4); FUNCTIONS IN: Rho guanyl-nucleotide exchange factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: inflorescence meristem, root hair, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 3 (TAIR:AT4G00460.2); Has 301 Blast hits to 299 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048767
IMP
Gene Ontologyroot hair elongation1
GO:0009664
IMP, IGI
Gene Ontologyplant-type cell wall organization2 3
GO:0050832
IMP
Gene Ontologydefense response to fungus4
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005085
IEA
GOA Databaseguanyl-nucleotide exchange factor activity
GO:0005085
ISS
Gene Ontologyguanyl-nucleotide exchange factor activity5
GO:0005085
IEA
InterProguanyl-nucleotide exchange factor activity
GO:0005515
IPI
Gene Ontologyprotein binding6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA
Gene Ontologyplasma membrane7
GO:0009531
IDA
Gene Ontologysecondary cell wall2
GO:0016324
IDA
Gene Ontologyapical plasma membrane8
GO:0005737
IEA
GOA Databasecytoplasm
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038937 Rop guanine nucleotide exchange factor
IPR005512 PRONE domain
Mapman id Description
27.4.3.1 Multi-process regulation.Rop-GTPase regulatory system.RopGEF guanine nucleotide exchange factor activities.exchange factor (PRONE)