Gene: SEGI_27348
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_27348
- Transcript Identifier SEGI_27348.1
- Gene Type Coding gene
- Location chr6 : 644989660-645011209 : positive
Gene Family Information
- ID HOM05D001780
- #Genes/#Species 367/100
- Phylogenetic origin
- ID ORTHO05D004373
- #Genes/#Species 182/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid SEGI_27348.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006428 | ISO | PLAZA Homology (enrichment) | isoleucyl-tRNA aminoacylation | HOM05D001780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0004822 | IEA | InterPro | isoleucine-tRNA ligase activity | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000049 | IEA | InterPro | tRNA binding | |
| GO:0002161 | ISO | PLAZA Homology (enrichment) | aminoacyl-tRNA editing activity | HOM05D001780 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013155 | Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding |
| IPR023586 | Isoleucine-tRNA ligase, type 2 |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR002300 | Aminoacyl-tRNA synthetase, class Ia |
| IPR033709 | Isoleucyl tRNA synthetase type 2, anticodon-binding domain |
| Mapman id | Description |
|---|---|
| 50.6.1 | Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond |