Gene: SEGI_26884
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_26884
- Transcript Identifier SEGI_26884.1
- Gene Type Coding gene
- Location chr3 : 184128560-184153923 : positive
Gene Family Information
- ID HOM05D001642
- #Genes/#Species 393/100
- Phylogenetic origin
- ID ORTHO05D001949
- #Genes/#Species 333/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid SEGI_26884.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010015 | ISO | PLAZA Integrative Orthology | root morphogenesis | AT3G25520 |
| GO:0006913 | ISO | PLAZA Integrative Orthology | nucleocytoplasmic transport | AT3G25520 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT5G39740 |
| GO:0009965 | ISO | PLAZA Integrative Orthology | leaf morphogenesis | AT5G39740 |
| GO:0009955 | ISO | PLAZA Integrative Orthology | adaxial/abaxial pattern specification | AT5G39740 |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G39740 |
| GO:0008097 | IEA | InterPro | 5S rRNA binding | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G39740 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G39740 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G25520 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G25520 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G25520 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT3G25520 |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT3G25520 |
| GO:0035101 | IEA | InterPro | FACT complex | |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT5G39740 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G39740 |
| GO:0022625 | ISO | PLAZA Integrative Orthology | cytosolic large ribosomal subunit | AT5G39740 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G39740 |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |