Gene: SEGI_05239

General Information

Structural Information

  • Species Sequoiadendron giganteum
  • Gene Identifier SEGI_05239
  • Transcript Identifier SEGI_05239.1
  • Gene Type Coding gene
  • Location chr8 : 229891098-229891940 : positive

Gene Family Information

  • ID HOM05D000244
  • #Genes/#Species 1727/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SEGI_05239.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045824
ISO
PLAZA Integrative Orthologynegative regulation of innate immune response AT1G20900
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT2G42940
GO:0010529
ISO
PLAZA Integrative Orthologynegative regulation of transposition AT2G42940
GO:0010208
ISO
PLAZA Integrative Orthologypollen wall assembly AT2G42940
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G60870
GO:0009938
ISO
PLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathway AT4G35390
GO:0006325
ISO
PLAZA Integrative Orthologychromatin organization AT1G20900
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT1G20900
GO:1900111
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K9 dimethylation AT2G42940
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT1G20900
GO:0035067
ISO
PLAZA Integrative Orthologynegative regulation of histone acetylation AT2G42940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G20900
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G42940
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT4G35390
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT4G35390
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT1G20900
GO:0031490
ISO
PLAZA Integrative Orthologychromatin DNA binding AT2G42940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G42940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014476 AT-hook motif nuclear-localized protein 15-29
IPR005175 PPC domain
Mapman id Description
15.5.8.1 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL)