Gene: RcHm_v2.0_Chr3g0477981

General Information

Structural Information

Species Rosa chinensis
Gene Identifier RcHm_v2.0_Chr3g0477981
Transcript Identifier RcHm_v2.0_Chr3g0477981
Gene Type Coding gene
Location RcHm_v2.0_Chr3 : 23858552-23860513 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000218
#Genes/#Species 1867/96
Phylogenetic origin

ID ORTHO05D000125
#Genes/#Species 1823/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT1G31340
GO:0009693	ISO	PLAZA Integrative Orthology	ethylene biosynthetic process	AT1G31340
GO:0045116	ISO	PLAZA Integrative Orthology	protein neddylation	AT1G31340
GO:0009733	ISO	PLAZA Integrative Orthology	response to auxin	AT1G31340

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G31340

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G31340
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT1G31340
GO:0005622	ISO	PLAZA Integrative Orthology	intracellular anatomical structure	AT2G35635

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR038738	Nedd8-like ubiquitin
IPR019956	Ubiquitin domain
IPR000626	Ubiquitin-like domain
IPR029071	Ubiquitin-like domain superfamily

Mapman id	Description
19.2.2.3.1	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).ubiquitin-fold protein (RUB)