Gene: Pp3c9_6780

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_6780
  • Transcript Identifier Pp3c9_6780V3.2
  • Gene Type Coding gene
  • Location Chr09 : 3866451-3871638 : negative

Gene Family Information

  • ID HOM05D000272
  • #Genes/#Species 1595/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_6780V3.2
  • pacid 32911868
  • alias Phypa_92125
  • alias Phpat.009G028700
  • alias Pp1s220_67V6
  • uniprot A0A2K1K2B6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT5G02030
GO:0010077
ISO
PLAZA Integrative Orthologymaintenance of inflorescence meristem identity AT5G02030
GO:0010076
ISO
PLAZA Integrative Orthologymaintenance of floral meristem identity AT5G02030
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT2G35940
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT4G32980
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT5G02030
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT4G32980
GO:0007389
ISO
PLAZA Integrative Orthologypattern specification process AT5G02030
GO:0080006
ISO
PLAZA Integrative Orthologyinternode patterning AT5G02030
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT2G23760
GO:0010371
ISO
PLAZA Integrative Orthologyregulation of gibberellin biosynthetic process AT4G32980
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT2G35940
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT1G75410
GO:0010229
ISO
PLAZA Integrative Orthologyinflorescence development AT2G27990
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT5G02030
GO:0010227
ISO
PLAZA Integrative Orthologyfloral organ abscission AT4G32980
GO:1905393
ISO
PLAZA Integrative Orthologyplant organ formation AT5G02030
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT5G02030
GO:0010223
ISO
PLAZA Integrative Orthologysecondary shoot formation AT5G02030
GO:0010201
ISO
PLAZA Integrative Orthologyresponse to continuous far red light stimulus by the high-irradiance response system AT2G35940
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0008285
ISO
PLAZA Integrative Orthologynegative regulation of cell population proliferation AT4G32980
GO:0009610
ISO
PLAZA Integrative Orthologyresponse to symbiotic fungus AT2G35940
GO:0090470
ISO
PLAZA Integrative Orthologyshoot organ boundary specification AT4G32980
GO:0048457
ISO
PLAZA Integrative Orthologyfloral whorl morphogenesis AT5G02030
GO:0048363
ISO
PLAZA Integrative Orthologymucilage pectin metabolic process AT2G23760
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G02030
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT5G02030
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G41410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G75410
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT2G35940
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G02030
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G75410
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT2G35940
GO:0140110
ISO
PLAZA Integrative Orthologytranscription regulator activity AT2G23760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G35940
GO:0005634
IEA
GOA Databasenucleus
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G41410
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G02030

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR006563 POX domain
IPR009057 Homeobox-like domain superfamily
IPR008422 Homeobox KN domain
Mapman id Description
15.5.3.5 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (BEL)