Gene: AT4G32980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G32980
  • Transcript Identifier AT4G32980.1
  • Gene Type Coding gene
  • Location Chr4 : 15914865-15916873 : negative

Gene Family Information

  • ID HOM05D000272
  • #Genes/#Species 1595/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G32980.1
  • symbol ATH1
  • full_name homeobox gene 1
  • uniprot P48731

Descriptions

  • Description homeobox protein ATH1
  • Computational description homeobox gene 1 (ATH1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 5042 Blast hits to 5042 proteins in 335 species: Archae - 0; Bacteria - 0; Metazoa - 2114; Fungi - 285; Plants - 2468; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010073
IGI
Gene Ontologymeristem maintenance1
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2
GO:0009640
IDA
Gene Ontologyphotomorphogenesis3
GO:0090470
IMP
Gene Ontologyshoot organ boundary specification4
GO:0010227
IMP
Gene Ontologyfloral organ abscission4
GO:0008285
IMP
Gene Ontologynegative regulation of cell population proliferation4
GO:0010228
IMP
Gene Ontologyvegetative to reproductive phase transition of meristem5
GO:0010371
IMP
Gene Ontologyregulation of gibberellin biosynthetic process6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
ISS
Gene OntologyDNA binding3
GO:0003677
IEA
InterProDNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding2
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific2
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding7
GO:0005515
IPI
Gene Ontologyprotein binding8
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity9

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001356 Homeobox domain
IPR006563 POX domain
IPR008422 Homeobox KN domain
Mapman id Description
15.5.3.5 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (BEL)