Gene: Pp3c9_2020

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_2020
  • Transcript Identifier Pp3c9_2020V3.2
  • Gene Type Coding gene
  • Location Chr09 : 1231534-1232538 : negative

Gene Family Information

  • ID HOM05D000233
  • #Genes/#Species 1790/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_2020V3.2
  • pacid 32913071
  • alias Pp1s90_184V6
  • alias Phpat.009G007800
  • alias Phypa_48356
  • uniprot A0A2K1K1M1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Solyc07g053740.1
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold Os01g0797600
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT3G20310
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT5G44210
GO:0010337
ISO
PLAZA Integrative Orthologyregulation of salicylic acid metabolic process Os01g0797600
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation Os01g0797600
GO:0080141
ISO
PLAZA Integrative Orthologyregulation of jasmonic acid biosynthetic process Os01g0797600
GO:0009864
ISO
PLAZA Integrative Orthologyinduced systemic resistance, jasmonic acid mediated signaling pathway AT3G15210
GO:0080027
ISO
PLAZA Integrative Orthologyresponse to herbivore Os01g0797600
GO:0009625
ISO
PLAZA Integrative Orthologyresponse to insect Os01g0797600
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT1G28370
GO:0010728
ISO
PLAZA Integrative Orthologyregulation of hydrogen peroxide biosynthetic process Os01g0797600
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G20310
GO:0010105
ISO
PLAZA Integrative Orthologynegative regulation of ethylene-activated signaling pathway AT1G50640
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway Solyc10g006130.1
GO:2000068
ISO
PLAZA Integrative Orthologyregulation of defense response to insect Os01g0797600
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT3G15210
GO:0010364
ISO
PLAZA Integrative Orthologyregulation of ethylene biosynthetic process Solyc01g095500.3
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding Os01g0797600
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT1G28370
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress Os01g0797600
GO:0080113
ISO
PLAZA Integrative Orthologyregulation of seed growth Os01g0797600
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid Os01g0797600
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT3G20310
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid Os01g0797600
GO:0009735
ISO
PLAZA Integrative Orthologyresponse to cytokinin Os01g0797600
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc10g006130.1
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G20310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20310
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G20310
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT3G20310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT3G20310
GO:0005634
IEA
GOA Databasenucleus
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT3G15210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)