Gene: Pp3c9_1990

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_1990
  • Transcript Identifier Pp3c9_1990V3.2
  • Gene Type Coding gene
  • Location Chr09 : 1216543-1219026 : positive

Gene Family Information

  • ID HOM05D002056
  • #Genes/#Species 323/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_1990V3.2
  • pacid 32911222
  • alias Pp1s90_180V6
  • alias Phpat.009G007700
  • alias Phypa_131713
  • uniprot A0A2K1K1L9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IBA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061025
IBA
GOA Databasemembrane fusion
GO:0007030
IBA
GOA DatabaseGolgi organization
GO:0031468
IBA
GOA Databasenuclear membrane reassembly
GO:0000045
IBA
GOA Databaseautophagosome assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0043130
IBA
GOA Databaseubiquitin binding
GO:0051117
ISO
PLAZA Integrative OrthologyATPase binding AT4G04210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
GOA Databasecytosol
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012989 SEP domain
IPR036241 NSFL1 cofactor p47, SEP domain superfamily
IPR009060 UBA-like superfamily
IPR001012 UBX domain
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
19.2.4.5.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.inner nuclear membrane-associated protein degradation (INMAD).substrate-to-CDC48 bridging factor (PUX3/4/5)