Gene: Pp3c9_13310

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_13310
  • Transcript Identifier Pp3c9_13310V3.2
  • Gene Type Coding gene
  • Location Chr09 : 8921278-8923937 : negative

Gene Family Information

  • ID HOM05D002787
  • #Genes/#Species 248/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_13310V3.2
  • pacid 32912830
  • alias Phypa_161046
  • alias Phpat.009G052000
  • alias Pp1s29_114V6
  • uniprot A9RUE5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006401
ISO
PLAZA Integrative OrthologyRNA catabolic process AT2G40410
GO:0006308
ISO
PLAZA Integrative OrthologyDNA catabolic process AT2G40410
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT2G40410
GO:0004520
ISO
PLAZA Integrative Orthologyendodeoxyribonuclease activity AT2G40410
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G56170
GO:0004518
IBA
GOA Databasenuclease activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035437 SNase-like, OB-fold superfamily
IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
IPR016071 Staphylococcal nuclease (SNase-like), OB-fold
Mapman id Description
35.1 not assigned.annotated