Gene: Pp3c8_2690

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c8_2690
  • Transcript Identifier Pp3c8_2690V3.4
  • Gene Type Coding gene
  • Location Chr08 : 1359951-1363373 : negative

Gene Family Information

  • ID HOM05D000660
  • #Genes/#Species 863/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c8_2690V3.4
  • pacid 32966365
  • alias Phpat.008G011300
  • alias Pp1s35_152V6
  • uniprot A0A2K1K5Y1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0106167
ISO
PLAZA Integrative Orthologyextracellular ATP signaling AT2G22300
GO:0070417
ISO
PLAZA Integrative Orthologycellular response to cold AT2G22300
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT2G22300
GO:0050826
ISO
PLAZA Integrative Orthologyresponse to freezing AT5G09410
GO:0071275
ISO
PLAZA Integrative Orthologycellular response to aluminum ion AT5G64220
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G09410
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT2G22300
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G09410
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G09410
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT2G22300
GO:1900367
ISO
PLAZA Integrative Orthologypositive regulation of defense response to insect AT2G22300
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G22300
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT2G22300
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G16940
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT2G22300
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT2G22300
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G64220
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G67310
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005559 CG-1 DNA-binding domain
IPR002110 Ankyrin repeat
IPR014756 Immunoglobulin E-set
IPR013783 Immunoglobulin-like fold
IPR002909 IPT domain
IPR000048 IQ motif, EF-hand binding site
IPR036770 Ankyrin repeat-containing domain superfamily
Mapman id Description
15.5.26 RNA biosynthesis.transcriptional regulation.transcription factor (CAMTA)