Gene: Pp3c6_28230
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c6_28230
- Transcript Identifier Pp3c6_28230V3.2
- Gene Type Coding gene
- Location Chr06 : 18449157-18450949 : positive
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000151
- #Genes/#Species 1649/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c6_28230V3.2
- pacid 32975781
- alias Phypa_135141
- alias Pp1s117_16V6
- alias Phpat.006G101400
- uniprot A0A2K1KHE6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048653 | ISO | PLAZA Integrative Orthology | anther development | Os07g0566500 |
| GO:0010628 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression | AT1G61110 |
| GO:1902890 | ISO | PLAZA Integrative Orthology | regulation of root hair elongation | AT1G77450 |
| GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | Os01g0884300 |
| GO:1901002 | ISO | PLAZA Integrative Orthology | positive regulation of response to salt stress | Os11g0184900 |
| GO:0008361 | ISO | PLAZA Integrative Orthology | regulation of cell size | AT5G08790 |
| GO:0009413 | ISO | PLAZA Integrative Orthology | response to flooding | AT3G04070 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G01720 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT5G08790 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc04g005610.3 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | Os01g0884300 |
| GO:0010099 | ISO | PLAZA Integrative Orthology | regulation of photomorphogenesis | AT5G08790 |
| GO:1902265 | ISO | PLAZA Integrative Orthology | abscisic acid homeostasis | Solyc04g005610.3 |
| GO:1902584 | ISO | PLAZA Integrative Orthology | positive regulation of response to water deprivation | Os03g0815100 |
| GO:0045995 | ISO | PLAZA Integrative Orthology | regulation of embryonic development | AT1G52880 |
| GO:0009620 | ISO | PLAZA Integrative Orthology | response to fungus | AT5G08790 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT3G15500 |
| GO:0009788 | ISO | PLAZA Integrative Orthology | negative regulation of abscisic acid-activated signaling pathway | AT1G01720 |
| GO:0009744 | ISO | PLAZA Integrative Orthology | response to sucrose | AT5G08790 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | Solyc04g005610.3 |
| GO:0010365 | ISO | PLAZA Integrative Orthology | positive regulation of ethylene biosynthetic process | AT3G04070 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | Os01g0884300 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G61110 |
| GO:0009831 | ISO | PLAZA Integrative Orthology | plant-type cell wall modification involved in multidimensional cell growth | AT1G61110 |
| GO:0048317 | ISO | PLAZA Integrative Orthology | seed morphogenesis | AT1G52880 |
| GO:1900057 | ISO | PLAZA Integrative Orthology | positive regulation of leaf senescence | AT1G77450 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT5G08790 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | Os07g0566500 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT5G08790 |
| GO:0009835 | ISO | PLAZA Integrative Orthology | fruit ripening | AT1G69490 |
| GO:0001666 | ISO | PLAZA Integrative Orthology | response to hypoxia | AT5G63790 |
| GO:0009825 | ISO | PLAZA Integrative Orthology | multidimensional cell growth | AT1G69490 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT5G08790 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT1G77450 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT1G69490 |
| GO:0019760 | ISO | PLAZA Integrative Orthology | glucosinolate metabolic process | AT5G63790 |
| GO:0031155 | ISO | PLAZA Integrative Orthology | regulation of reproductive fruiting body development | Solyc05g007770.3 |
| GO:0080060 | ISO | PLAZA Integrative Orthology | integument development | AT1G52880 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | Solyc05g007770.3 |
| GO:0009646 | ISO | PLAZA Integrative Orthology | response to absence of light | Solyc04g005610.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019900 | ISO | PLAZA Integrative Orthology | kinase binding | AT1G01720 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | Solyc05g007770.3 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT4G27410 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G63790 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | Os03g0815100 |
| GO:0001216 | ISO | PLAZA Integrative Orthology | DNA-binding transcription activator activity | AT1G77450 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G63790 |
| GO:0043424 | ISO | PLAZA Integrative Orthology | protein histidine kinase binding | AT5G08790 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G63790 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G04070 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |