Gene: AT5G08790
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G08790
- Transcript Identifier AT5G08790.1
- Gene Type Coding gene
- Location Chr5 : 2859113-2860144 : negative
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000151
- #Genes/#Species 1649/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G08790.1
- symbol ATAF2
- uniprot Q9C598
Descriptions
- Description NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
- Computational description ATAF2; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 102 (TAIR:AT5G63790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1902584 | ISO | PLAZA Integrative Orthology | positive regulation of response to water deprivation | Os03g0815100 |
| GO:1901002 | ISO | PLAZA Integrative Orthology | positive regulation of response to salt stress | Os03g0815100 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010150 | IMP | Gene Ontology | leaf senescence | 1 |
| GO:0045892 | IDA | Gene Ontology | negative regulation of transcription, DNA-templated | 2 |
| GO:0010099 | IMP | Gene Ontology | regulation of photomorphogenesis | 2 |
| GO:0045893 | IDA | Gene Ontology | positive regulation of transcription, DNA-templated | 3 |
| GO:0009793 | IMP | Gene Ontology | embryo development ending in seed dormancy | 4 |
| GO:0009753 | IEP | Gene Ontology | response to jasmonic acid | 5 |
| GO:0009751 | IEP | Gene Ontology | response to salicylic acid | 5 |
| GO:0009744 | IEP | Gene Ontology | response to sucrose | 5 |
| GO:0009620 | IMP | Gene Ontology | response to fungus | 5 |
| GO:0009416 | IEP | Gene Ontology | response to light stimulus | 5 |
| GO:0008361 | IMP | Gene Ontology | regulation of cell size | 5 |
| GO:0009611 | IEP | Gene Ontology | response to wounding | 6 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | IPI | Gene Ontology | sequence-specific DNA binding | 7 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | Os03g0815100 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | IDA | Gene Ontology | DNA-binding transcription factor activity | 7 |
| GO:0043424 | IPI | Gene Ontology | protein histidine kinase binding | 8 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 8 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 9 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |