Gene: AT3G04070
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G04070
- Transcript Identifier AT3G04070.1
- Gene Type Coding gene
- Location Chr3 : 1061573-1062976 : negative
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000151
- #Genes/#Species 1649/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G04070.1
- symbol NAC047
- Alias ANAC047,NAC domain containing protein 47,SHG,SPEEDY HYPONASTIC GROWTH
- uniprot Q9SQQ5
Descriptions
- Description NAC domain containing protein 47
- Computational description NAC domain containing protein 47 (NAC047); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC-like, activated by AP3/PI (TAIR:AT1G69490.1); Has 3042 Blast hits to 3035 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3042; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009793 | IMP | Gene Ontology | embryo development ending in seed dormancy | 1 |
| GO:0009413 | IMP | Gene Ontology | response to flooding | 2 |
| GO:0010365 | IDA | Gene Ontology | positive regulation of ethylene biosynthetic process | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | Gene Ontology | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 3 |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |